Preferred Name

alimentary part of gastrointestinal system

Synonyms

gastrointestinal tract

gastro-intestinal system

GI tract

gastrointestinal system

alimentary system

gastrointestinal (GI) tract

alimentary tract

Definitions

The part of the digestive system that excludes the hepatobiliary system.

ID

http://purl.obolibrary.org/obo/UBERON_0005409

database_cross_reference

GAID:294

galen:GastrointestinalTract

FMA:71132

CALOHA:TS-0407

MESH:A03.492

EHDAA2:0000110

MA:0000323

EMAPA:16246

EV:0100056

VHOG:0000412

UMLS:C0012240

EHDAA:514

BTO:0000058

http://linkedlifedata.com/resource/umls/id/C0012240

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C12378

http://www.snomedbrowser.com/Codes/Details/373871007

editor note

the decision to split digestive and gastrointestinal in this way may be revisited. As it currently stands, this class more closely aligns what MA calls the alimentary system

existence ends during

http://purl.obolibrary.org/obo/UBERON_0000066

external_definition

The system that includes the esophagus, stomach, small and large intestine, anus, liver, biliary tract, and pancreas[ncithesaurus:Gastrointestinal_System].

external_ontology_notes

that many anatomy ontologies consider this synonymous with digestive system. here we follow MA in dividing digestive system into gastrointestinal and hepatobiliary. hepatobiliary includes the liver and biliary tract. species-specific AO classes are categorized according to whether liver is included. For example, XAO includes liver as part of XAO:0000125 alimentary system, so we assume this class is the more generic class. We have one entity that is part of both gastrointestinal and hepatobiliary systems: hepatopancreatic ampulla.

has_obo_namespace

uberon

has_related_synonym

gastrointestinal tract

gastro-intestinal system

GI tract

gastrointestinal system

alimentary system

gastrointestinal (GI) tract

alimentary tract

homology_notes

All metazoans (with degenerate exceptions) have some sort of digestive cavity with a means of entrance to and exit from it.[well established][VHOG]

id

UBERON:0005409

imported from

http://purl.obolibrary.org/obo/uberon.owl

http://purl.obolibrary.org/obo/oae.owl

in_subset

http://purl.oboInOwllibrary.org/oboInOwl/uberon/core#pheno_slim

label

alimentary part of gastrointestinal system

notation

UBERON:0005409

part_of

http://purl.obolibrary.org/obo/UBERON_0001007

prefLabel

alimentary part of gastrointestinal system

textual definition

The part of the digestive system that excludes the hepatobiliary system.

treeView

http://purl.obolibrary.org/obo/UBERON_0001007

subClassOf

http://purl.obolibrary.org/obo/UBERON_0000467

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http://purl.obolibrary.org/obo/UBERON_0005409 Ontology of Adverse Events / 不良事件本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0005409 Ontology of Adverse Events / 不良事件本体 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0005409 中国人类表型本体 / Human Phenotype Ontology China LOOM
http://purl.obolibrary.org/obo/UBERON_0005409 中国人类表型本体 / Human Phenotype Ontology China SAME_URI
http://purl.obolibrary.org/obo/UBERON_0005409 Phenotypic Quality Ontology / 表型特质本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0005409 Phenotypic Quality Ontology / 表型特质本体 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0005409 Uber Anatomy Ontology / 超级解剖学本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0005409 Uber Anatomy Ontology / 超级解剖学本体 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0005409 Cell Line Ontology Subset for Chinese National Infrastructure of Cell Line Resource (NICR) / 国家实验细胞资源共享服务平台(NICR)细胞系本体子集 LOOM
http://purl.obolibrary.org/obo/UBERON_0005409 Cell Line Ontology Subset for Chinese National Infrastructure of Cell Line Resource (NICR) / 国家实验细胞资源共享服务平台(NICR)细胞系本体子集 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0005409 细胞系本体(中文翻译) / Cell Line Ontology (Chinese Translation) SAME_URI
http://purl.obolibrary.org/obo/UBERON_0005409 Human Disease Ontology / 人类疾病本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0005409 Human Disease Ontology / 人类疾病本体 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0005409 International Classification of Diseases Ontology / 国际疾病分类本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0005409 International Classification of Diseases Ontology / 国际疾病分类本体 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0005409 Experimental Factor Ontology / 实验性因素本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0005409 Experimental Factor Ontology / 实验性因素本体 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0005409 Environment Ontology / 环境本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0005409 Environment Ontology / 环境本体 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0005409 Cell Ontology / 细胞本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0005409 Cell Ontology / 细胞本体 SAME_URI