Cell Ontology / 细胞本体

Last uploaded: September 7, 2023
Preferred Name

alimentary part of gastrointestinal system

Synonyms

gastrointestinal system

GI tract

gastroenterological system

gastro-intestinal system

gastrointestinal tract

alimentary tract

alimentary system

gastrointestinal (GI) tract

Definitions

The part of the digestive system that excludes the hepatobiliary system.

ID

http://purl.obolibrary.org/obo/UBERON_0005409

database_cross_reference

SCTID:373871007

FMA:71132

EHDAA2:0000110

MESH:D041981

CALOHA:TS-0407

galen:GastrointestinalTract

NCIT:C12378

GAID:294

EHDAA:514

BTO:0000058

VHOG:0000412

EMAPA:16246

EV:0100056

MA:0000323

UMLS:C0012240

definition

The part of the digestive system that excludes the hepatobiliary system.

editor note

the decision to split digestive and gastrointestinal in this way may be revisited. As it currently stands, this class more closely aligns what MA calls the alimentary system

existence ends during

http://purl.obolibrary.org/obo/UBERON_0000066

has_obo_namespace

uberon

has_related_synonym

gastrointestinal system

GI tract

gastroenterological system

gastro-intestinal system

gastrointestinal tract

alimentary tract

alimentary system

gastrointestinal (GI) tract

id

UBERON:0005409

in_subset

http://purl.obolibrary.org/obo/uberon/core#pheno_slim

label

alimentary part of gastrointestinal system

notation

UBERON:0005409

part_of

http://purl.obolibrary.org/obo/UBERON_0001007

prefLabel

alimentary part of gastrointestinal system

treeView

http://purl.obolibrary.org/obo/UBERON_0001007

UBPROP_0000001

The system that includes the esophagus, stomach, small and large intestine, anus, liver, biliary tract, and pancreas[ncithesaurus:Gastrointestinal_System].

UBPROP_0000003

All metazoans (with degenerate exceptions) have some sort of digestive cavity with a means of entrance to and exit from it.[well established][VHOG]

UBPROP_0000012

that many anatomy ontologies consider this synonymous with digestive system. here we follow MA in dividing digestive system into gastrointestinal and hepatobiliary. hepatobiliary includes the liver and biliary tract. species-specific AO classes are categorized according to whether liver is included. For example, XAO includes liver as part of XAO:0000125 alimentary system, so we assume this class is the more generic class. We have one entity that is part of both gastrointestinal and hepatobiliary systems: hepatopancreatic ampulla.

subClassOf

http://purl.obolibrary.org/obo/UBERON_0000467

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http://purl.obolibrary.org/obo/UBERON_0005409 Ontology of Adverse Events / 不良事件本体 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0005409 中国人类表型本体 / Human Phenotype Ontology China LOOM
http://purl.obolibrary.org/obo/UBERON_0005409 中国人类表型本体 / Human Phenotype Ontology China SAME_URI
http://purl.obolibrary.org/obo/UBERON_0005409 Phenotypic Quality Ontology / 表型特质本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0005409 Phenotypic Quality Ontology / 表型特质本体 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0005409 Uber Anatomy Ontology / 超级解剖学本体 LOOM
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http://purl.obolibrary.org/obo/UBERON_0005409 Human Disease Ontology / 人类疾病本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0005409 Human Disease Ontology / 人类疾病本体 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0005409 International Classification of Diseases Ontology / 国际疾病分类本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0005409 International Classification of Diseases Ontology / 国际疾病分类本体 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0005409 Experimental Factor Ontology / 实验性因素本体 LOOM
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http://purl.obolibrary.org/obo/UBERON_0005409 Environment Ontology / 环境本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0005409 Environment Ontology / 环境本体 SAME_URI