Sequence Types and Features Ontology / 序列类型和特征本体 - lncRNA - Classes | BMICC MedPortal Appliance

Sequence Types and Features Ontology / 序列类型和特征本体

Last uploaded: March 7, 2023

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Preferred Name	lncRNA
Synonyms	INSDC_feature:ncRNA INSDC_qualifier:lncRNA long non-coding RNA lncRNA_transcript
Definitions	A non-coding RNA generally longer than 200 nucleotides that cannot be classified as any other ncRNA subtype. Similar to mRNAs, lncRNAs are mainly transcribed by RNA polymerase II, are often capped by 7-methyl guanosine at their 5' ends, polyadenylated at their 3' ends and may be spliced. Updated the definition of lncRNA (SO:0001877) from "A non-coding RNA over 200nucleotides in length." to "A non-coding RNA generally longer than 200 nucleotides that cannot be classified as any other ncRNA subtype. Similar to mRNAs, lncRNAs are mainly transcribed by RNA polymerase II, are often capped by 7-methyl guanosine at their 5' ends, polyadenylated at their 3' ends and may be spliced." See GitHub Issue #575
ID	http://purl.obolibrary.org/obo/SO_0001877
comment	Updated the definition of lncRNA (SO:0001877) from "A non-coding RNA over 200nucleotides in length." to "A non-coding RNA generally longer than 200 nucleotides that cannot be classified as any other ncRNA subtype. Similar to mRNAs, lncRNAs are mainly transcribed by RNA polymerase II, are often capped by 7-methyl guanosine at their 5' ends, polyadenylated at their 3' ends and may be spliced." See GitHub Issue #575
created_by	kareneilbeck
creation_date	2012-02-14T05:18:01Z
database_cross_reference	http://www.gencodegenes.org/gencode_biotypes.html
definition	A non-coding RNA generally longer than 200 nucleotides that cannot be classified as any other ncRNA subtype. Similar to mRNAs, lncRNAs are mainly transcribed by RNA polymerase II, are often capped by 7-methyl guanosine at their 5' ends, polyadenylated at their 3' ends and may be spliced.
has_broad_synonym	INSDC_feature:ncRNA
has_exact_synonym	INSDC_qualifier:lncRNA long non-coding RNA lncRNA_transcript
has_obo_namespace	sequence
id	SO:0001877
label	lncRNA
notation	SO:0001877
prefLabel	lncRNA
subClassOf	http://purl.obolibrary.org/obo/SO_0000655

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Delete	Mapping To	Ontology	Source
	http://purl.obolibrary.org/obo/SO_0001877	MicroRNA Ontology / MicroRNA本体	LOOM
	http://purl.obolibrary.org/obo/SO_0001877	MicroRNA Ontology / MicroRNA本体	SAME_URI