GenEpiO / 基因组流行病学本体

Last uploaded: September 8, 2023
Preferred Name

cell line

Definitions

The term 'line' is used when a culture has undergone an intentional experimental process to establish a more uniform and stable population of cells (see 'establishing cell line'). This will require one or more passages, but may involve additional selection processes. Through such passaging and/or selection processes, the resulting 'line' attains some level of genetic stability and compositional homogeneity which is typically absent in primary cultures. Because of their relative homogeneity, ‘lines’ are capable of being characterized and stably propagated over a period of time. A new *type* of cell line can be established not only through the passaging/selection of a primary culture, but also through experimental modifications of existing lines (e.g. immortalization, stable genetic modifications, drug selection for a resistant subset, etc.). The definition provided here establishes the 'scale' of cell populations that qualify as cell lines - specifically those with a shared propagation history in culture. In this way, the 'cell line' class demarcates populations that represent what researchers actually use in the practice of science - e.g. as inputs to culturing, experimentation, and sharing. The definition is such that cell lines will exhibit important attributes. For example, they will have a relatively homogenous cell type composition as they have experienced similar selective pressures due to their continuous co-propagation. In addition, these populations can also be characterized by a passage number, again owing to their common passaging history.  As defined here, 'cell line' can refer to a population of cells in active culture, applied experimentally, or stored in a quiescent state for future use. A cultured cell population that represents a genetically stable and homogenous population of cultured cells that shares a common propagation history (i.e. has been successively passaged together in culture).

ID

http://purl.obolibrary.org/obo/CLO_0000031

comment

The term 'line' is used when a culture has undergone an intentional experimental process to establish a more uniform and stable population of cells (see 'establishing cell line'). This will require one or more passages, but may involve additional selection processes. Through such passaging and/or selection processes, the resulting 'line' attains some level of genetic stability and compositional homogeneity which is typically absent in primary cultures. Because of their relative homogeneity, ‘lines’ are capable of being characterized and stably propagated over a period of time. A new *type* of cell line can be established not only through the passaging/selection of a primary culture, but also through experimental modifications of existing lines (e.g. immortalization, stable genetic modifications, drug selection for a resistant subset, etc.). The definition provided here establishes the 'scale' of cell populations that qualify as cell lines - specifically those with a shared propagation history in culture. In this way, the 'cell line' class demarcates populations that represent what researchers actually use in the practice of science - e.g. as inputs to culturing, experimentation, and sharing. The definition is such that cell lines will exhibit important attributes. For example, they will have a relatively homogenous cell type composition as they have experienced similar selective pressures due to their continuous co-propagation. In addition, these populations can also be characterized by a passage number, again owing to their common passaging history.  As defined here, 'cell line' can refer to a population of cells in active culture, applied experimentally, or stored in a quiescent state for future use.

definition

A cultured cell population that represents a genetically stable and homogenous population of cultured cells that shares a common propagation history (i.e. has been successively passaged together in culture).

A cultured cell population that represents a genetically stable and homogenous population of cultured cells that shares a common propagation history (i.e. has been successively passaged together in culture).

editor preferred label

cell line

imported from

http://purl.obolibrary.org/obo/clo.owl

label

cell line

prefixIRI

CLO:0000031

prefLabel

cell line

term editor

MB, SS, JZ, MAH, BP, CS, YH

subClassOf

http://purl.obolibrary.org/obo/OBI_0001905

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Delete Mapping To Ontology Source
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C16403 National Cancer Institute Thesaurus / 美国国家癌症研究所词典 LOOM
http://purl.obolibrary.org/obo/CLO_0000031 BioAssay Ontology / 生物活性分析本体 LOOM
http://purl.obolibrary.org/obo/CLO_0000031 BioAssay Ontology / 生物活性分析本体 SAME_URI
http://purl.obolibrary.org/obo/CLO_0000031 Ontology for Biomedical Investigations / 生物医学研究本体 LOOM
http://purl.obolibrary.org/obo/CLO_0000031 Ontology for Biomedical Investigations / 生物医学研究本体 SAME_URI
http://purl.obolibrary.org/obo/CLO_0000031 Cell Line Ontology Subset for Chinese National Infrastructure of Cell Line Resource (NICR) / 国家实验细胞资源共享服务平台(NICR)细胞系本体子集 LOOM
http://purl.obolibrary.org/obo/CLO_0000031 Cell Line Ontology Subset for Chinese National Infrastructure of Cell Line Resource (NICR) / 国家实验细胞资源共享服务平台(NICR)细胞系本体子集 SAME_URI
http://purl.obolibrary.org/obo/CLO_0000031 细胞系本体(中文翻译) / Cell Line Ontology (Chinese Translation) SAME_URI
http://purl.obolibrary.org/obo/CLO_0000031 Ontology for Biobanking / 生物样本库本体 LOOM
http://purl.obolibrary.org/obo/CLO_0000031 Ontology for Biobanking / 生物样本库本体 SAME_URI
http://purl.bioontology.org/ontology/MESH/D002460 Medical Subject Headings / 医学主题词表 LOOM
http://semanticscience.org/resource/SIO_010054 Semanticscience Integrated Ontology / 语义科学集成本体 LOOM