GenEpiO / 基因组流行病学本体

Last uploaded: September 8, 2023
Preferred Name

454 Genome Sequencer FLX

Definitions

is a DNA sequencer which was first manufactured by 454 Life Science Corporation in 2008 and enables pyrosequencing to be performed. It comprises both optics and fluidics subsystems, which are controlled by a computer subsystem. The fluidics subsystem ensures accurate reagent dispensing. It consists of a reagents cassette (which holds the reagent containers), a sipper manifold, pumps, valves, and debubblers. The fluidics subsystem flows the sequencing reagents across the wells of the PicoTiterPlate device, and moves the spent reagents from the PicoTiterPlate device to the waste receptacle. The optics subsystem consists of a CCD camera and a camera controller. The camera captures the light emitted in the wells of the PicoTiterPlate device during each step of the sequencing cycle, and sends the digital images to the computer subsystem for processing. The computer controls the other Sequencer subsystems, and processes the digital images sent by the camera to extract the DNA sequence information. It has the ability to sequence 400-600 million base pairs per run with 400-500 base pair read lengths.

ID

http://purl.obolibrary.org/obo/OBI_0000702

database_cross_reference

NCBI SRA: 454 GS FLX

definition

is a DNA sequencer which was first manufactured by 454 Life Science Corporation in 2008 and enables pyrosequencing to be performed. It comprises both optics and fluidics subsystems, which are controlled by a computer subsystem. The fluidics subsystem ensures accurate reagent dispensing. It consists of a reagents cassette (which holds the reagent containers), a sipper manifold, pumps, valves, and debubblers. The fluidics subsystem flows the sequencing reagents across the wells of the PicoTiterPlate device, and moves the spent reagents from the PicoTiterPlate device to the waste receptacle. The optics subsystem consists of a CCD camera and a camera controller. The camera captures the light emitted in the wells of the PicoTiterPlate device during each step of the sequencing cycle, and sends the digital images to the computer subsystem for processing. The computer controls the other Sequencer subsystems, and processes the digital images sent by the camera to extract the DNA sequence information. It has the ability to sequence 400-600 million base pairs per run with 400-500 base pair read lengths.

definition source

adapted from https://www.roche-applied-science.com/servlet/RCProductDisplay?langId=-1&storeId=10202&productId=3.8.8.1.1.3&catalogId=10202&krypto=mgV8a0Sdps6%2BCXU8IoddmzNEyGgjde9j8MOFCiMzRsduELeenAlVZ%2FE1QR%2BxLpzNlqMZPLRHqaI%3D&ddkey=https:RCProductDisplay

editor preferred label

454 Genome Sequencer FLX

has curation status

http://purl.obolibrary.org/obo/IAO_0000120

imported from

http://purl.obolibrary.org/obo/obi.owl

label

454 Genome Sequencer FLX

prefixIRI

OBI:0000702

prefLabel

454 Genome Sequencer FLX

term editor

Philippe Rocca-Serra

subClassOf

http://purl.obolibrary.org/obo/GENEPIO_0001937

http://purl.obolibrary.org/obo/OBI_0400103

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http://purl.obolibrary.org/obo/OBI_0000702 Ontology for Biomedical Investigations / 生物医学研究本体 LOOM
http://purl.obolibrary.org/obo/OBI_0000702 Ontology for Biomedical Investigations / 生物医学研究本体 SAME_URI