Preferred Name

cell death

Synonyms

accidental cell death

necrosis

Definitions

Any biological process that results in permanent cessation of all vital functions of a cell. A cell should be considered dead when any one of the following molecular or morphological criteria is met: (1) the cell has lost the integrity of its plasma membrane; (2) the cell, including its nucleus, has undergone complete fragmentation into discrete bodies (frequently referred to as apoptotic bodies). The cell corpse (or its fragments) may be engulfed by an adjacent cell in vivo, but engulfment of whole cells should not be considered a strict criteria to define cell death as, under some circumstances, live engulfed cells can be released from phagosomes (see PMID:18045538). This term should not be used for direct annotation. The only exception should be when experimental data (e.g., staining with trypan blue or propidium iodide) show that cell death has occurred, but fail to provide details on death modality (accidental versus programmed). When information is provided on the cell death mechanism, annotations should be made to the appropriate descendant of 'cell death' (such as, but not limited to, GO:0097300 'programmed necrotic cell death' or GO:0006915 'apoptotic process'). Also, if experimental data suggest that a gene product influences cell death indirectly, rather than being involved in the death process directly, consider annotating to a 'regulation' term.

ID

http://purl.obolibrary.org/obo/GO_0008219

comment

This term should not be used for direct annotation. The only exception should be when experimental data (e.g., staining with trypan blue or propidium iodide) show that cell death has occurred, but fail to provide details on death modality (accidental versus programmed). When information is provided on the cell death mechanism, annotations should be made to the appropriate descendant of 'cell death' (such as, but not limited to, GO:0097300 'programmed necrotic cell death' or GO:0006915 'apoptotic process'). Also, if experimental data suggest that a gene product influences cell death indirectly, rather than being involved in the death process directly, consider annotating to a 'regulation' term.

definition

Any biological process that results in permanent cessation of all vital functions of a cell. A cell should be considered dead when any one of the following molecular or morphological criteria is met: (1) the cell has lost the integrity of its plasma membrane; (2) the cell, including its nucleus, has undergone complete fragmentation into discrete bodies (frequently referred to as apoptotic bodies). The cell corpse (or its fragments) may be engulfed by an adjacent cell in vivo, but engulfment of whole cells should not be considered a strict criteria to define cell death as, under some circumstances, live engulfed cells can be released from phagosomes (see PMID:18045538).

has_obo_namespace

biological_process

has_related_synonym

accidental cell death

necrosis

id

GO:0008219

label

cell death

notation

GO:0008219

prefLabel

cell death

subClassOf

http://purl.obolibrary.org/obo/GO_0009987

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/GO_0008219 Gene Ontology / 基因本体 LOOM
http://purl.obolibrary.org/obo/GO_0008219 Gene Ontology / 基因本体 SAME_URI
http://purl.obolibrary.org/obo/GO_0008219 Ontology of Adverse Events / 不良事件本体 LOOM
http://purl.obolibrary.org/obo/GO_0008219 Ontology of Adverse Events / 不良事件本体 SAME_URI
http://purl.obolibrary.org/obo/GO_0008219 中国人类表型本体 / Human Phenotype Ontology China LOOM
http://purl.obolibrary.org/obo/GO_0008219 中国人类表型本体 / Human Phenotype Ontology China SAME_URI
http://purl.obolibrary.org/obo/GO_0008219 BioAssay Ontology / 生物活性分析本体 LOOM
http://purl.obolibrary.org/obo/GO_0008219 BioAssay Ontology / 生物活性分析本体 SAME_URI
http://purl.obolibrary.org/obo/GO_0008219 Uber Anatomy Ontology / 超级解剖学本体 LOOM
http://purl.obolibrary.org/obo/GO_0008219 Uber Anatomy Ontology / 超级解剖学本体 SAME_URI
http://purl.obolibrary.org/obo/GO_0008219 Experimental Factor Ontology / 实验性因素本体 LOOM
http://purl.obolibrary.org/obo/GO_0008219 Experimental Factor Ontology / 实验性因素本体 SAME_URI
http://purl.obolibrary.org/obo/GO_0008219 Cell Ontology / 细胞本体 LOOM
http://purl.obolibrary.org/obo/GO_0008219 Cell Ontology / 细胞本体 SAME_URI
http://purl.bioontology.org/ontology/MESH/D016923 Medical Subject Headings / 医学主题词表 LOOM
http://purl.obolibrary.org/obo/MPATH_2 中国人类表型本体 / Human Phenotype Ontology China LOOM