loading...| Preferred Name |
Severe acute respiratory syndrome coronavirus 2 |
| Synonyms |
HCoV-19; COVID-19 virus; SARS-2; Human coronavirus 2019; SARS-CoV2; SARS2; 2019-nCoV COVID-19 virus SARS2 Human coronavirus 2019 COVID19 HCoV-19 SARS-2 COVID-19 SARS-CoV2 SARS-CoV-2 2019-nCoV Wuhan coronavirus |
| Definitions |
The list of the marker variants is as follows (as of 3/6/2021): S: C8782T,T28144C includes NS8-L84S L: C241,C3037,A23403,C8782,G11083,G26144,T28144 (early clade markers in WIV04-reference sequence) V: G11083T,G26144T NSP6-L37F + NS3-G251V G: C241T,C3037T,A23403G includes S-D614G GH: C241T,C3037T,A23403G,G25563T includes S-D614G + NS3-Q57H GR: C241T,C3037T,A23403G,G28882A includes S-D614G + N-G204R GV: C241T,C3037T,A23403G,C22227T includes S-D614G + S-A222V GRY: C241T,C3037T,21765-21770del,21991-21993del,A23063T,A23403G,G28882A includes S-H69del, S-V70del, S-Y144del, S-N501Y + S-D614G + N-G204R Reference: https://www.gisaid.org/references/statements-clarifications/clade-and-lineage-nomenclature-aids-in-genomic-epidemiology-of-active-hcov-19-viruses/ |
| ID |
http://purl.obolibrary.org/obo/NCBITaxon_2697049 |
| comment |
The list of the marker variants is as follows (as of 3/6/2021): S: C8782T,T28144C includes NS8-L84S L: C241,C3037,A23403,C8782,G11083,G26144,T28144 (early clade markers in WIV04-reference sequence) V: G11083T,G26144T NSP6-L37F + NS3-G251V G: C241T,C3037T,A23403G includes S-D614G GH: C241T,C3037T,A23403G,G25563T includes S-D614G + NS3-Q57H GR: C241T,C3037T,A23403G,G28882A includes S-D614G + N-G204R GV: C241T,C3037T,A23403G,C22227T includes S-D614G + S-A222V GRY: C241T,C3037T,21765-21770del,21991-21993del,A23063T,A23403G,G28882A includes S-H69del, S-V70del, S-Y144del, S-N501Y + S-D614G + N-G204R Reference: https://www.gisaid.org/references/statements-clarifications/clade-and-lineage-nomenclature-aids-in-genomic-epidemiology-of-active-hcov-19-viruses/ |
| alternative term |
Wuhan seafood market pneumonia virus Wuhan coronavirus |
| database_cross_reference |
GC_ID:1 |
| definition source |
https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2697049 |
| has exact synonym |
HCoV-19; COVID-19 virus; SARS-2; Human coronavirus 2019; SARS-CoV2; SARS2; 2019-nCoV COVID-19 virus SARS2 Human coronavirus 2019 COVID19 HCoV-19 SARS-2 COVID-19 SARS-CoV2 SARS-CoV-2 2019-nCoV Wuhan coronavirus |
| has_broad_synonym |
SARS-CoV-2 |
| has_obo_namespace |
ncbi_taxonomy |
| id |
NCBITaxon:2697049 |
| imported from |
http://purl.obolibrary.org/obo/pr.owl |
| label |
Severe acute respiratory syndrome coronavirus 2 SARS-CoV-2 severe acute respiratory syndrome coronavirus 2 |
| notation |
NCBITaxon:2697049 |
| prefLabel |
Severe acute respiratory syndrome coronavirus 2 |
| subClassOf |
http://purl.obolibrary.org/obo/NCBITaxon_2509511 http://purl.obolibrary.org/obo/NCBITaxon_694002 |