Preferred Name

paraxial mesoderm

Synonyms

somitic mesoderm

paraxial mesenchyme

mesoderma paraxiale

Definitions

The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO]

ID

http://purl.obolibrary.org/obo/UBERON_0003077

database_cross_reference

EMAPA:16183

UMLS:C1284009

TAO:0000255

ZFA:0000255

VHOG:0000114

EFO:0003515

XAO:0000259

FMA:293145

EMAPA:16751

AAO:0010568

http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C34244

http://www.snomedbrowser.com/Codes/Details/361475002

http://linkedlifedata.com/resource/umls/id/C1284009

http://en.wikipedia.org/wiki/Paraxial_mesoderm

depicted_by

http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png

external_definition

Mesoderm lateral to the neural tube and notochord that is divided into cranial and post-cranial portions. The trunk portions further segment into somites.[AAO]

external_ontology_notes

note that all AOs differ in the relationship between this structure and the mesoderm; in ZFA it is a subclass (and this is implied by the GO definition and GO relationships), in AAO it is part of, and in EHDAA2 it develops from the mesoderm (but in EHDAA2 the naming convention is to use 'paraxial mesenchyme', rather than 'paraxial mesoderm'). Also in ZFA it is part of the trunk whereas this conflicts with the division into head and trunk in ehdaa2 (which we follow here)

has_exact_synonym

somitic mesoderm

paraxial mesenchyme

has_obo_namespace

uberon

has_related_synonym

mesoderma paraxiale

homology_notes

Presently, Cephalochordata, Urochordata, and Vertebrata are placed as subphyla of the phylum Chordata, in which the overall organization of embryonic tissues (dorsal hollow nerve cord, ventral digestive tract, axial notochord, and bilateral paraxial mesoderm) is largely conserved. In contrast, the echinoderms and hemichordates are sister groups of the chordates and they lack the notochord and paraxial mesoderm. Thus, the basic mesodermal organization of vertebrates must have appeared first in the common ancestor of the chordates.[well established][VHOG]

id

UBERON:0003077

immediate transformation of

http://purl.obolibrary.org/obo/UBERON_0007285

imported from

http://purl.obolibrary.org/obo/uberon.owl

in_lateral_side_of

http://purl.obolibrary.org/obo/UBERON_0000922

in_subset

http://purl.obolibrary.org/obo/uberon#vertebrate_core

http://purl.obolibrary.org/obo/uberon/core#uberon_slim

http://purl.obolibrary.org/obo/uberon/core#efo_slim

http://purl.obolibrary.org/obo/uberon#uberon_slim

http://purl.obolibrary.org/obo/uberon/core#vertebrate_core

label

paraxial mesoderm

notation

UBERON:0003077

part_of

http://purl.obolibrary.org/obo/UBERON_0000922

prefLabel

paraxial mesoderm

textual definition

The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO]

treeView

http://purl.obolibrary.org/obo/UBERON_0000922

subClassOf

http://purl.obolibrary.org/obo/UBERON_0005291

http://purl.obolibrary.org/obo/UBERON_0007524

http://purl.obolibrary.org/obo/UBERON_0004120

http://purl.obolibrary.org/obo/UBERON_0015212

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Delete Mapping To Ontology Source
http://purl.obolibrary.org/obo/UBERON_0003077 中国人类表型本体 / Human Phenotype Ontology China LOOM
http://purl.obolibrary.org/obo/UBERON_0003077 中国人类表型本体 / Human Phenotype Ontology China SAME_URI
http://purl.obolibrary.org/obo/UBERON_0003077 Phenotypic Quality Ontology / 表型特质本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0003077 Phenotypic Quality Ontology / 表型特质本体 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0003077 Uber Anatomy Ontology / 超级解剖学本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0003077 Uber Anatomy Ontology / 超级解剖学本体 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0003077 Experimental Factor Ontology / 实验性因素本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0003077 Experimental Factor Ontology / 实验性因素本体 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0003077 Environment Ontology / 环境本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0003077 Environment Ontology / 环境本体 SAME_URI
http://purl.obolibrary.org/obo/UBERON_0003077 Cell Ontology / 细胞本体 LOOM
http://purl.obolibrary.org/obo/UBERON_0003077 Cell Ontology / 细胞本体 SAME_URI
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C34244 National Cancer Institute Thesaurus / 美国国家癌症研究所词典 LOOM
http://purl.org/sig/ont/fma/fma293145 Foundational Model of Anatomy / 解剖学基础模型本体 LOOM